Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015876807.1_cds_XP_016436263.1_32140
CDS Infomation

[gene=LOC107762420] [db_xref=GeneID:107762420] [protein=uncharacterized protein LOC107762420] [protein_id=XP_016436263.1] [location=join(50418..50510,51300..51427,51503..51653,51828..51937,53084..53167,53253..53301,53421..53512,54669..54798,54972..55995,56890..57000,57290..57909)] [gbkey=CDS]
Sequence

ATGAGCAATGAAGGAGAGAAAAGGTGTCCTCTTTGTGCCGAAGAGATGGACTGGACAGAT
CAGCAGTTTAAGCCTTGTAAATGTGGTTATCAGGTGTGTCTTTGGTGTTGGCATCACATA
ATGGACATGGCAGAAAAAGACGAGTCAGAGGGTCGATGTCCTGCATGTCGAACAACATAT
GAAAAGGAGAAAGTTGTTAAAATGCAAGCAAATATTGAGAGAGCAGGGAACAACAACGTC
CACCGGAAAAGCAAACAACCAAAAGCAAAGCCAAAAACTAATGAAGTCAAGAAAGATCTC
ACAAATGTTCGGGTCATTCAACGTAAAATGGCATATGTGATTGGGCTGCCTCTTAGTCTT
GCAGATGAAGATCTTTTACAGCGGAAAGAATATTTTGGGCAGTATGGAAAAGTTACTAAA
ATTTCTCTTTCTCGGACGACTGGTGGTGCAATTCAGCAATTTGTTAATGATTCCTGTAGT
GTATATATTACGTATTCAAAAGAAGAGGAGGCCGTACGATGTATTCAATCTGTGCATGGT
TTTGTCTTGGAAGATAGGTATTTGAGAGCATCCTTTGGGACTGCAAAGTACTGCCATGCG
TGGTTGAGAAACTTGCCTTGCGGTAATCCTTCTTGTCTATATTTGCATAGCATTGGTGCT
GATGAAGATAGTTTTGGTAAAGATGATGCAGCTGCAATTCATACAAGGAATAGAGTTCAA
CAAATTGTTGGCGACATCAGTAATATGACGAATCGCTCAGGAAATGTCTTGCCACCTCCG
ATTGATGAATTATCGAATACATCGACTGAGAAATCTAGCATTAGAAATGCAACAAGTGAT
GCAGCAAATGATGCAATTAATTACAGTAGCTACACGGCTCATGGAATTCCTTATGTTAAG
GATATAGATTCTGGTGTGCCGAACCGAATGACAACTTTTGTAGATATTGTTGGACGGTCC
AACACTTCAGGTACAGAGAGAGATGGAAATAGCAATGAAGATTGTAGGATTTTGGATTTA
TCTTCTGACCTATCTTCAGTAACCATTACTAATGGTAATCATGGTCATGAAACATATCCG
AACACAACTCTGTTCAAAGTTTCATCTTCAAGTCACCTTGTCAATAATCTGTGGGGGAAC
CAAAATTCTGTTGAATTTTCTGATGAACCATTCGGGGAACATTATATATCTTCTGATGAT
CAAGGACTGAAGGATTCAAGTAGCGTGGCTCTAAGGGCTTTTCTTATGTCATCTTGTTCT
GCTCAATCCACAGAGGACTCCGGTGATCATTCATTAGTACATAAGTCATATAGTCCGTGT
AGCAATGGAAGGGATTTTGGAGCTTTACATAATCAAGTGGATGAAGCTTCTCTGCCACTT
TCATGTGTAAATGCAATATTAAATGAAGGAATACATGATATGAAATTCCAAAGTTCTGTC
AAATCTGATAGGGTTTACAGAAGTTCTACCTCATTCTCCAATGAAGAAATAGTGCAGCAC
CTACGGAGGATTGATAGTGATAACTCGACTAACTATGAGGATTCATCATTCAATGCTGTA
GAAAGCAGTATTATTTCAAATATTATGTCAATTGACTTTGATTCATGTGATGATTCAATG
GCCTTACGTCGTAGCTTTGCTGGCTCGTATAATGAATCTGATGGGAAGCTTGGTGCTACC
TGGAACTCTTTGCATAATGATCAATCGGGGTTCTCTTTCGTGAAGCAAGATGACTTTTCA
AGGCAAGAATGTGATTTAGAGTCTCCTTTTAGTAATATTGGTCAGGTATCAAAGAATTCA
TCCATCCCTCAAGATTTCAGAGAGAACAAGGATCAGTATGTGCAGAAGGCTTCGTATCAA
ATCACTAGACCAAAAGTTTTGGCTCCACCTGGATTTTCAATGCCCTCTGGGGACCTGCTT
CGCGGTTTTGCCTCATCTGATGAAATAGGACGAATCCCTCGTGCTCTCTCCGGAAGTCAT
TCAGTAAATAGTTCTTCATCAAGTTTGCTTCACACACCATCAACTGGAAGTATTAGCAGT
GCAGGTGATATTGATTTTGTTGAACCTGCCATATCAAGCTGTGGAAGCGGCAAGCCAACA
AATGGTTTTGATATCTCTGCCCTGGAAATCGGGTCAGCTTGTGTACCACAGTTTAGAGCC
TTTGAAGACGAGGCAAGAATCTGGCATTTGATGCAACAAAAATCTGTAGATCAAGAAGGG
AAATTCTCTCAAGTTTTTGTTTCACAAACACCGTCTGTTCATCAATTACAAAGATTTCCT
GGTCATGGCGGGGATGAATATTTTGGTCTAGATGATATATATGGCTTCTCATCGATGGTG
AACCGACACCAAAGTTTTGATCCATCTTCCTATTCACAATTTCCACAACAAAAGCTTGCC
AATGGTAACATCTTTAATGGCTTCCAGCACAATAGTTTCCGCGATATCCATCATAGTAAT
GAAGTAGACTGCTTGACAGAACTCCAGAAAAATGAGAGATTAGGTTTCAAAAATTTCTAT
GCTGGATATGGAGATATGATGTTCCAGGCGCCCAGGTCTGGCGATGTATACACCAGAGTT
TTTGGAATGTAA

Peptide Sequence

PEP ID

XP_016436263.1
PEP Infomation

PREDICTED: uncharacterized protein LOC107762420 [Nicotiana tabacum]
Sequence

MSNEGEKRCPLCAEEMDWTDQQFKPCKCGYQVCLWCWHHIMDMAEKDESEGRCPACRTTY
EKEKVVKMQANIERAGNNNVHRKSKQPKAKPKTNEVKKDLTNVRVIQRKMAYVIGLPLSL
ADEDLLQRKEYFGQYGKVTKISLSRTTGGAIQQFVNDSCSVYITYSKEEEAVRCIQSVHG
FVLEDRYLRASFGTAKYCHAWLRNLPCGNPSCLYLHSIGADEDSFGKDDAAAIHTRNRVQ
QIVGDISNMTNRSGNVLPPPIDELSNTSTEKSSIRNATSDAANDAINYSSYTAHGIPYVK
DIDSGVPNRMTTFVDIVGRSNTSGTERDGNSNEDCRILDLSSDLSSVTITNGNHGHETYP
NTTLFKVSSSSHLVNNLWGNQNSVEFSDEPFGEHYISSDDQGLKDSSSVALRAFLMSSCS
AQSTEDSGDHSLVHKSYSPCSNGRDFGALHNQVDEASLPLSCVNAILNEGIHDMKFQSSV
KSDRVYRSSTSFSNEEIVQHLRRIDSDNSTNYEDSSFNAVESSIISNIMSIDFDSCDDSM
ALRRSFAGSYNESDGKLGATWNSLHNDQSGFSFVKQDDFSRQECDLESPFSNIGQVSKNS
SIPQDFRENKDQYVQKASYQITRPKVLAPPGFSMPSGDLLRGFASSDEIGRIPRALSGSH
SVNSSSSSLLHTPSTGSISSAGDIDFVEPAISSCGSGKPTNGFDISALEIGSACVPQFRA
FEDEARIWHLMQQKSVDQEGKFSQVFVSQTPSVHQLQRFPGHGGDEYFGLDDIYGFSSMV
NRHQSFDPSSYSQFPQQKLANGNIFNGFQHNSFRDIHHSNEVDCLTELQKNERLGFKNFY
AGYGDMMFQAPRSGDVYTRVFGM

Transcript Sequence

Gene sequence data has not been registered.